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test(SnverMeta, Properties, PrintWriter)
- Method in class net.sf.snver.pileup.core.
CoreAnalysis
Check for SnverMeta is satisfied with conditions
testErrorNumericProperty()
- Method in class net.sf.snver.pileup.test.
IndividualConfigurationFactoryTest
testErrorNumericProperty()
- Method in class net.sf.snver.pileup.test.
PoolConfigurationFactoryTest
testFormatDouble()
- Method in class net.sf.snver.pileup.util.
NumFormatTest
testFormatDouble1()
- Method in class net.sf.snver.pileup.util.
NumFormatTest
testLackOfFRequiredProperty()
- Method in class net.sf.snver.pileup.test.
IndividualConfigurationFactoryTest
testLackOfFRequiredProperty()
- Method in class net.sf.snver.pileup.test.
PoolConfigurationFactoryTest
testNormalRoutine()
- Method in class net.sf.snver.pileup.test.
IndividualConfigurationFactoryTest
testNormalRoutine()
- Method in class net.sf.snver.pileup.test.
PoolConfigurationFactoryTest
testNullProperty()
- Method in class net.sf.snver.pileup.test.
IndividualConfigurationFactoryTest
testNullProperty()
- Method in class net.sf.snver.pileup.test.
PoolConfigurationFactoryTest
testPileup()
- Method in class net.sf.snver.pileup.test.
SnverPileupReaderTest
testPrintHelp()
- Method in class net.sf.snver.pileup.test.
PoolConfigurationFactoryTest
testUnexpectedProperty()
- Method in class net.sf.snver.pileup.test.
IndividualConfigurationFactoryTest
testUnexpectedProperty()
- Method in class net.sf.snver.pileup.test.
PoolConfigurationFactoryTest
THRESHOLD_BQ
- Static variable in class net.sf.snver.pileup.config.
Dictionary
THRESHOLD_FISHER
- Static variable in class net.sf.snver.pileup.config.
Dictionary
THRESHOLD_MQ
- Static variable in class net.sf.snver.pileup.config.
Dictionary
THRESHOLD_P
- Static variable in class net.sf.snver.pileup.config.
Dictionary
THRESHOLD_STRAND
- Static variable in class net.sf.snver.pileup.config.
Dictionary
toString()
- Method in class net.sf.snver.pileup.loader.
Peeker
toString()
- Method in class net.sf.snver.pileup.meta.
SnverMeta
TYPE_BOOLEAN
- Static variable in class net.sf.snver.pileup.config.
Dictionary
TYPE_DOUBLE
- Static variable in class net.sf.snver.pileup.config.
Dictionary
TYPE_FILE
- Static variable in class net.sf.snver.pileup.config.
Dictionary
TYPE_INTEGER
- Static variable in class net.sf.snver.pileup.config.
Dictionary
TYPE_LONG
- Static variable in class net.sf.snver.pileup.config.
Dictionary
TYPE_NULLABLE
- Static variable in class net.sf.snver.pileup.config.
Dictionary
TYPE_STRING
- Static variable in class net.sf.snver.pileup.config.
Dictionary
TYPE_UNKNOWN
- Static variable in class net.sf.snver.pileup.config.
Dictionary
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