A B C D E F G H I M N O P S T U V

T

test(SnverMeta, Properties, PrintWriter) - Method in class net.sf.snver.pileup.core.CoreAnalysis
Check for SnverMeta is satisfied with conditions
testErrorNumericProperty() - Method in class net.sf.snver.pileup.test.IndividualConfigurationFactoryTest
 
testErrorNumericProperty() - Method in class net.sf.snver.pileup.test.PoolConfigurationFactoryTest
 
testFormatDouble() - Method in class net.sf.snver.pileup.util.NumFormatTest
 
testFormatDouble1() - Method in class net.sf.snver.pileup.util.NumFormatTest
 
testLackOfFRequiredProperty() - Method in class net.sf.snver.pileup.test.IndividualConfigurationFactoryTest
 
testLackOfFRequiredProperty() - Method in class net.sf.snver.pileup.test.PoolConfigurationFactoryTest
 
testNormalRoutine() - Method in class net.sf.snver.pileup.test.IndividualConfigurationFactoryTest
 
testNormalRoutine() - Method in class net.sf.snver.pileup.test.PoolConfigurationFactoryTest
 
testNullProperty() - Method in class net.sf.snver.pileup.test.IndividualConfigurationFactoryTest
 
testNullProperty() - Method in class net.sf.snver.pileup.test.PoolConfigurationFactoryTest
 
testPileup() - Method in class net.sf.snver.pileup.test.SnverPileupReaderTest
 
testPrintHelp() - Method in class net.sf.snver.pileup.test.PoolConfigurationFactoryTest
 
testUnexpectedProperty() - Method in class net.sf.snver.pileup.test.IndividualConfigurationFactoryTest
 
testUnexpectedProperty() - Method in class net.sf.snver.pileup.test.PoolConfigurationFactoryTest
 
THRESHOLD_BQ - Static variable in class net.sf.snver.pileup.config.Dictionary
 
THRESHOLD_FISHER - Static variable in class net.sf.snver.pileup.config.Dictionary
 
THRESHOLD_MQ - Static variable in class net.sf.snver.pileup.config.Dictionary
 
THRESHOLD_P - Static variable in class net.sf.snver.pileup.config.Dictionary
 
THRESHOLD_STRAND - Static variable in class net.sf.snver.pileup.config.Dictionary
 
toString() - Method in class net.sf.snver.pileup.loader.Peeker
 
toString() - Method in class net.sf.snver.pileup.meta.SnverMeta
 
TYPE_BOOLEAN - Static variable in class net.sf.snver.pileup.config.Dictionary
 
TYPE_DOUBLE - Static variable in class net.sf.snver.pileup.config.Dictionary
 
TYPE_FILE - Static variable in class net.sf.snver.pileup.config.Dictionary
 
TYPE_INTEGER - Static variable in class net.sf.snver.pileup.config.Dictionary
 
TYPE_LONG - Static variable in class net.sf.snver.pileup.config.Dictionary
 
TYPE_NULLABLE - Static variable in class net.sf.snver.pileup.config.Dictionary
 
TYPE_STRING - Static variable in class net.sf.snver.pileup.config.Dictionary
 
TYPE_UNKNOWN - Static variable in class net.sf.snver.pileup.config.Dictionary
 

A B C D E F G H I M N O P S T U V